Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015794575.1_cds_XP_016439719.1_3445
CDS Infomation

[gene=LOC107765565] [db_xref=GeneID:107765565] [protein=probable polyamine oxidase 5] [protein_id=XP_016439719.1] [location=complement(4201..5796)] [gbkey=CDS]
Sequence

ATGGGGAGCAAGAAGCCAAAAGTAGTGATAATTGGGGCAGGAATGGCTGGCCTTACAGCA
GCTAATAAGCTCTATAAAACAGCAGGATGCAAGGAATTATTAGAGGTGTGTGTAGTAGAG
GGTGGTAATAGGATTGGTGGAAGAATTAAGACATCAGAATTCTGTGGTGTCAGGATTGAA
ATGGGTGCTACTTGGATTCATGGAATTGTAGGCAGTCCTGTTTATAAGATTGCTCAACAA
ATTAACTCACTGCAATCTCAGCAACCTTGGGAGTGTATGGATGGAGATACTGAACCATTG
ACCATTGCTGAAGGTGGACATGAACTCAATTCTTCCCTTGTTGAGTCCATCTCCGACCTT
TTCAACAAACTCATGGATTTTGCTCAAGGGAAATTAGTCACTGAAGATGGTGTGTCCAAT
GAAATTGCTAAATCCAACAATGGATTAAGTCTTGGTTCTTTCCTCAGGAAAGGACTTGAT
GCTTATTGGGAATCAGTGAACGGCGAACGCGAGGATATTGAGGTACAAGGGATAGATAAA
TGGAGCAAAAGATCACTTGAAGAAGGGATTTTTGCAATGTTTGAGAATATTCAAAGGACT
TATACATCAGCTGGTGATTTGCAAATGCTTGATTTCAGTGCAGAAAAAGAGTATCGAATG
TTCCCTGGAGAAGAAATAACCATTGCCAAAGGGTACATGTCAGTGATTGAATATTTGGCA
TCTGTTCTGCCACCTGGTTTGATCCAATTAGGCCGAAAAGTCGCAAAGATGGAGTGGCAG
GCTGATGGTTCATTACAATTTGAAAATGGTAGTAATAATAAGGCAGTGAAGTTACATTTT
GTGGATGGATCAATTATGTATGCTGATCATGTCATAGTCACAGTTTCACTTGGAGTTCTA
AAACAAGGGATTGATCAAGATTCCGGTATGTTTAATCCTCCACTTCCTCATTTCAAGACT
CAAGCAATCTCAAGGCTTGGTTTTGGTGTTGTCAACAAGCTATTCTTGAAACTAAATCCA
ACCCATGATCAAGAATTTCCTTATCTGCAGATGGTTTTCCATCAATCAGAACCAAACCCA
AAAATCCCTATGTGGATGAAGAGGACAGCTAATTTATCTCCAATCCATAGCAAGTCAAGT
GTTTTATTATCATGGTTTGCAGGTAAAGAAGCTCTTGAGTTGGAATCTCTTGATAATGAG
GAGATTATTGATGGTTTTTCAAAAACTATCTCTAGCTTTCTTTTAAACTCAAAACATTTC
AAGAAATCAAATGACTTGTGCTGCAATGGGCATGCAGAAAGTAACTTTAAAGTGGAAAAG
GTGTTAAAGAGCCAATGGGGAAGTGATCCATTATTCTTGGGTTCCTATAGTTATGTAGCA
GTTGGATCAAGTGGAGATGATTTGGATATTATGGCTGAGCCCTTGCCAAAAAGGACTAGC
ATTCATTCAAATGGTTGCTATACTCCTCCACTTCAAATTCTTTTTGCAGGGGAAGCAACA
CATAGAACTCACTATTCAACAACTCATGGTGCTTACTTTAGTGGCCTAAGAGAAGCCAAT
AGGCTTCTTAATCACTATCATTTTATTGATATATGA

Peptide Sequence

PEP ID

XP_016439719.1
PEP Infomation

PREDICTED: probable polyamine oxidase 5 [Nicotiana tabacum]
Sequence

MGSKKPKVVIIGAGMAGLTAANKLYKTAGCKELLEVCVVEGGNRIGGRIKTSEFCGVRIE
MGATWIHGIVGSPVYKIAQQINSLQSQQPWECMDGDTEPLTIAEGGHELNSSLVESISDL
FNKLMDFAQGKLVTEDGVSNEIAKSNNGLSLGSFLRKGLDAYWESVNGEREDIEVQGIDK
WSKRSLEEGIFAMFENIQRTYTSAGDLQMLDFSAEKEYRMFPGEEITIAKGYMSVIEYLA
SVLPPGLIQLGRKVAKMEWQADGSLQFENGSNNKAVKLHFVDGSIMYADHVIVTVSLGVL
KQGIDQDSGMFNPPLPHFKTQAISRLGFGVVNKLFLKLNPTHDQEFPYLQMVFHQSEPNP
KIPMWMKRTANLSPIHSKSSVLLSWFAGKEALELESLDNEEIIDGFSKTISSFLLNSKHF
KKSNDLCCNGHAESNFKVEKVLKSQWGSDPLFLGSYSYVAVGSSGDDLDIMAEPLPKRTS
IHSNGCYTPPLQILFAGEATHRTHYSTTHGAYFSGLREANRLLNHYHFIDI

Transcript Sequence

Gene sequence data has not been registered.